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H H (Fg( H H ( d h 1' 0
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com.apple.print.ticket.stateFlag
0
com.apple.print.PageFormat.PMVerticalScaling
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PageFormat.PMVerticalScaling
1
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.subTicket.paper_info_ticket
com.apple.print.PageFormat.PMAdjustedPageRect
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PageFormat.PMAdjustedPageRect
0.0
0.0
730
552
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PageFormat.PMAdjustedPaperRect
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PageFormat.PMAdjustedPaperRect
-31
-30
761
582
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PaperInfo.PMConstrainedPaper
com.apple.print.ticket.creator
CUPS_CPL
com.apple.print.ticket.itemArray
com.apple.print.PaperInfo.PMConstrainedPaper
com.apple.print.ticket.client
CUPS_CPL
com.apple.print.ticket.modDate
2007-10-09T02:04:50Z
com.apple.print.ticket.stateFlag
1
com.apple.print.PaperInfo.PMPaperName
com.apple.print.ticket.creator
CUPS_CPL
com.apple.print.ticket.itemArray
com.apple.print.PaperInfo.PMPaperName
US Letter Small
com.apple.print.ticket.client
CUPS_CPL
com.apple.print.ticket.modDate
2007-10-09T02:04:50Z
com.apple.print.ticket.stateFlag
1
com.apple.print.PaperInfo.PMUnadjustedPageRect
com.apple.print.ticket.creator
CUPS_CPL
com.apple.print.ticket.itemArray
com.apple.print.PaperInfo.PMUnadjustedPageRect
0.0
0.0
730
552
com.apple.print.ticket.client
CUPS_CPL
com.apple.print.ticket.modDate
2007-10-09T02:04:50Z
com.apple.print.ticket.stateFlag
1
com.apple.print.PaperInfo.PMUnadjustedPaperRect
com.apple.print.ticket.creator
CUPS_CPL
com.apple.print.ticket.itemArray
com.apple.print.PaperInfo.PMUnadjustedPaperRect
-31
-30
761
582
com.apple.print.ticket.client
CUPS_CPL
com.apple.print.ticket.modDate
2007-10-09T02:04:50Z
com.apple.print.ticket.stateFlag
1
com.apple.print.PaperInfo.ppd.PMPaperName
com.apple.print.ticket.creator
CUPS_CPL
com.apple.print.ticket.itemArray
com.apple.print.PaperInfo.ppd.PMPaperName
LetterSmall
com.apple.print.ticket.client
CUPS_CPL
com.apple.print.ticket.modDate
2007-10-09T02:04:50Z
com.apple.print.ticket.stateFlag
1
com.apple.print.ticket.APIVersion
00.20
com.apple.print.ticket.privateLock
com.apple.print.ticket.type
com.apple.print.PaperInfoTicket
com.apple.print.ticket.APIVersion
00.20
com.apple.print.ticket.privateLock
com.apple.print.ticket.type
com.apple.print.PageFormatTicket
com.apple.print.PrintSettings.PMColorMode
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMColorMode
1
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PrintSettings.PMCopies
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMCopies
1
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PrintSettings.PMDestinationType
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMDestinationType
1
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PrintSettings.PMFirstPage
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMFirstPage
1
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PrintSettings.PMLastPage
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMLastPage
2147483647
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.PrintSettings.PMPageRange
com.apple.print.ticket.creator
com.apple.printingmanager
com.apple.print.ticket.itemArray
com.apple.print.PrintSettings.PMPageRange
1
2147483647
com.apple.print.ticket.client
com.apple.printingmanager
com.apple.print.ticket.modDate
2007-10-13T08:18:47Z
com.apple.print.ticket.stateFlag
0
com.apple.print.ticket.APIVersion
00.20
com.apple.print.ticket.privateLock
com.apple.print.ticket.type
com.apple.print.PrintSettingsTicket
^ Graph * @ @ ?ێ88?89 W DashSettings #
! 0 I Normal @
Geneva < H H H H $ $ 0 I Normal @
Geneva < H H H H $ $ 4 4 4 4 4 4 0
Normal @
Geneva < H H H H $ $ 4
4
4
4
4
4
0 home d d A 7 Integrin:Users:davidmorgan:DLMDocs:Teaching:IgorWeb:IgorSite:ECE4084: Integrin 7H+ A VECE4084 A W IgorSite W(p A V A O
j > | b DIntegrin:Users:davidmorgan:DLMDocs:Teaching:IgorWeb:IgorSite:ECE4084 E C E 4 0 8 4 I n t e g r i n ;Users/davidmorgan/DLMDocs/Teaching/IgorWeb/IgorSite/ECE4084 / > RecentWindows
Advanced Topics.ihf Analysis.ihf Current half fibre Dialog Help.ihf Distribution Errors.ihf Getting Started.ihf Graph0:SarcVel;Comp Graphics.ihf Help Browser Igor Reference.ihf Programming.ihf Progress SarcomereFunctions Using Igor.ihf What's Changed Since 6.00.ihf 4 Misc_End XOPState_Start Data Browser o r . i h f Gizmo
bre Dialog Help.XLLoadWave P @ Errors.ihf GettSurface Plotter Graph0:SarcVel;CInterpolate U' 4 XOPState_End NumSarcs @I MeanSL @ RandSL ExpSL ?ٙ V_Flag ? InitPassTen ?" |mg Step @@ NewPanel
Variable /g NumSarcs, MeanSL, RandSL, ExpSL
SetVariable setvar0 title="Number of sarcomeres",limits={10,Inf,10};DelayUpdate
SetVariable setvar0 value= NumSarcs
ShowTools/A
SetVariable setvar1 title="Mean sarcomere length",limits={1.2,4,0.1};DelayUpdate
SetVariable setvar1 value= MeanSL
SetVariable RandSL title="Random amplitude",limits={0,1,0.1},value= RandSL
SetVariable setvar0 rename=NumSarcs
SetVariable setvar1 rename=MeanSL
SetVariable ExpSL title="Exponential Amplitude",limits={0,1,0.1},value= ExpSL
DoWindow/C/R/T Distribution,"Distribution"
makeInitSL()
Display SL
ModifyGraph mode=3,marker=19,msize=1
makeInitSL()
Smooth 5, SL
makeInitSL()
Smooth 3, SL
SetVariable NumSarcs proc=MakeSLDist
SetVariable MeanSL proc=MakeSLDist
SetVariable RandSL proc=MakeSLDist
SetVariable ExpSL proc=MakeSLDist
SetVariable RandSL limits={0,1,0.01}
SetAxis left 1.5,4
AppendToGraph/R PassTen
SetAxis right 0,1.5
SL2ActTen(0)
Display CnrTen vs CnrSL
SL2ActTen(0)
AppendToGraph/R PIso
DoWindow/R Distribution
HideTools/A
DoWindow/R Distribution
Duplicate PassTen PassTenCon
variable /g InitPassTen
SetVariable InitPassTen proc=MakeSLDist,title="Initial passive tension";DelayUpdate
SetVariable InitPassTen limits={0,1,0.01},value= InitPassTen
KillControl InitPassTen
Make TimeW, TensionW, LengthW
Make Test
SetScale/I x 0,1,"", Test
Test=P2V(x,1)
Display Test
ModifyGraph swapXY=1
SetAxis bottom 0,1
SetAxis bottom 0,4
Test=P2V(x,1)
Test=P2V(x,1)
SetAxis bottom 0,1
Test=P2V(x,1)
Test=P2V(x,.5)
Test=P2V(x,1)
SetAxis bottom -1,1
Test=P2V(x,1)
ModifyGraph swapXY=0
SetAxis bottom 0,2
SetScale/I x 0,2,"", Test
Test=P2V(x,1)
Test=P2V(x,1)
Test=P2V(x,1)
Test=P2V(x,1)
Test=P2V(x,1)
Test=P2V(x,1)
Test=P2V(x,1)
DoWindow/C/R/T CurrenthalfFibre,"Current half fibre"
Display TensionW,LengthW vs TimeW
DoWindow/C/T Progress,"Progress"
ControlBar 25
Variable /g CT
Variable /g Step
Step=0
Duplicate SL, SarcVel
Duplicate SL, DelSL
Duplicate SL, Comp
TimeStep(0)
Label left "\\s(SL)SL (m)"
Label right "Tension"
TimeStep(0)
ShowInfo
Reset()
Reset()
TimeStep(0)
print initpassten
0.165299
Reset()
Reset()
TimeStep(0)
Reset()
Reset()
SetAxis/A
SetAxis left 0,1
Tensionw=.2
Reset()
TimeStep(0)
Tensionw=.2
Tensionw=InitPassTen
Tensionw=Nan
Tensionw[0]=Initpassten
Reset()
Reset()
Reset()
Reset()
TimeStep(0)
Reset()
Display SarcVel
Reset()
TimeStep(0)
Reset()
TimeStep(0)
AppendToGraph/R Comp
Legend/C/N=text0/A=MC
Reset()
TimeStep(0)
Reset()
TimeStep(0)
Reset()
TimeStep(0)
Reset()
TimeStep(0)
TimeStep(1)
TimeStep(2)
TimeStep(3)
TimeStep(4)
Reset()
TimeStep(0)
TimeStep(1)
TimeStep(2)
TimeStep(3)
TimeStep(4)
SetAxis left 0,1.5
Reset()
Reset()
TimeStep(4)
Reset()
Reset()
0 -1 0.01
1 -0.641175 0.0155964
2 -0.442431 0.0226024
3 -0.316181 0.0316274
4 -0.228879 0.0436912
5 -0.16491 0.0606392
6 -0.116022 0.0861906
7 -0.0774446 0.129125
8 -0.0462269 0.216324
9 -0.0204463 0.489087
10 0.000356383 -28.0597
Reset()
0 0.0333733 -1 0.01
1 0.133373 -0.641175 0.0155964
2 0.233373 -0.442431 0.0226024
3 0.333373 -0.316181 0.0316274
4 0.433373 -0.228879 0.0436912
5 0.533373 -0.16491 0.0606392
6 0.633373 -0.116022 0.0861906
7 0.733373 -0.0774446 0.129125
8 0.833373 -0.0462269 0.216324
9 0.933373 -0.0204463 0.489087
10 1.03337 0.000356383 -28.0597
Reset()
0 0.0333733 -1 0.0111111
1 0.144484 -0.613631 0.0194692
2 0.263954 -0.398227 0.0335315
3 0.397485 -0.25693 0.0637226
4 0.561208 -0.150037 0.199853
5 0.861061 -0.0386093 -0.162891
Reset()
0 0.0333733 -1 0.00909091
1 0.124282 -0.665053 0.013071
2 0.211211 -0.478431 0.0172881
3 0.293923 -0.36006 0.0217363
4 0.372187 -0.278765 0.0264016
5 0.445785 -0.219886 0.0312611
6 0.514524 -0.175626 0.0362811
7 0.578243 -0.141449 0.0414166
8 0.636827 -0.114539 0.0466116
9 0.690215 -0.0930484 0.0518005
10 0.738414 -0.0757141 0.0569106
11 0.781504 -0.0616372 0.0618669
12 0.819637 -0.0501576 0.0665967
13 0.85304 -0.0407753 0.0710352
14 0.882005 -0.0331022 0.0751302
15 0.906875 -0.0268302 0.0788456
16 0.928029 -0.0217099 0.0821626
17 0.945867 -0.0175375 0.0850792
18 0.960787 -0.0141446 0.0876082
19 0.973179 -0.0113915 0.0897734
20 0.983406 -0.0091624 0.0916066
21 0.991799 -0.00736109 0.0931436
22 0.998655 -0.00590812 0.0944215
23 1.00423 -0.00473799 0.0954763
24 1.00876 -0.00379698 0.0963419
25 1.01242 -0.00304109 0.0970487
26 1.01537 -0.00243451 0.0976234
27 1.01774 -0.00194815 0.0980891
28 1.01965 -0.00155846 0.0984655
29 1.02119 -0.00124639 0.0987689
30 1.02242 -0.000996606 0.0990132
31 1.02341 -0.000796736 0.0992096
32 1.0242 -0.000636861 0.0993672
33 1.02483 -0.000509009 0.0994936
34 1.02534 -0.000406802 0.0995948
35 1.02574 -0.000325081 0.099676
36 1.02607 -0.000259771 0.0997409
37 1.02633 -0.000207581 0.0997928
38 1.02653 -0.000165854 0.0998344
39 1.0267 -0.000132518 0.0998677
40 1.02683 -0.000105883 0.0998942
41 1.02694 -8.46039e-05 0.0999155
42 1.02702 -6.7598e-05 0.0999324
43 1.02709 -5.40001e-05 0.099946
44 1.02714 -4.31355e-05 0.0999569
45 1.02719 -3.44551e-05 0.0999656
46 1.02722 -2.75266e-05 0.0999725
47 1.02725 -2.19867e-05 0.099978
48 1.02727 -1.75757e-05 0.0999824
49 1.02729 -1.40522e-05 0.0999859
50 1.0273 -1.12229e-05 0.0999888
51 1.02731 -8.96859e-06 0.099991
52 1.02732 -7.1699e-06 0.0999928
53 1.02733 -5.73149e-06 0.0999943
54 1.02733 -4.58182e-06 0.0999954
55 1.02734 -3.67058e-06 0.0999963
56 1.02734 -2.92625e-06 0.0999971
57 1.02735 -2.32758e-06 0.0999977
58 1.02735 -1.84813e-06 0.0999982
59 1.02735 -1.46405e-06 0.0999985
60 1.02735 -1.17533e-06 0.0999988
61 1.02735 -9.36914e-07 0.0999991
62 1.02735 -7.46178e-07 0.0999993
63 1.02735 -6.03126e-07 0.0999994
64 1.02735 -4.83916e-07 0.0999995
65 1.02735 -3.88548e-07 0.0999996
66 1.02736 -3.17023e-07 0.0999997
67 1.02736 -2.45497e-07 0.0999998
68 1.02736 -1.97813e-07 0.0999998
69 1.02736 -1.50129e-07 0.0999998
70 1.02736 -1.26287e-07 0.0999999
71 1.02736 -1.02446e-07 0.0999999
72 1.02736 -7.86036e-08 0.0999999
73 1.02736 -5.47618e-08 0.0999999
74 1.02736 -5.47618e-08 0.0999999
75 1.02736 -5.47618e-08 0.0999999
76 1.02736 -5.47618e-08 0.0999999
77 1.02736 -5.47618e-08 0.0999999
78 1.02736 -5.47618e-08 0.0999999
79 1.02736 -5.47618e-08 0.0999999
80 1.02736 -5.47618e-08 0.0999999
81 1.02736 -5.47618e-08 0.0999999
82 1.02736 -5.47618e-08 0.0999999
83 1.02736 -5.47618e-08 0.0999999
84 1.02736 -5.47618e-08 0.0999999
85 1.02736 -5.47618e-08 0.0999999
86 1.02736 -5.47618e-08 0.0999999
87 1.02736 -5.47618e-08 0.0999999
Reset()
DoWindow/C/R/T LengthTension,"Length Tension Curve"
SetAxis left -1,0
Reset()
Label left "Velocity"
Reset()
Reset()
Reset()
Reset()
Reset()
ShowInfo
Reset()
Reset()
Reset()
MainLoop()
Redimension/N=1000 TimeW,TensionW,LengthW
Reset()
MainLoop()
Reset()
Reset()
Reset()
Reset()
Reset()
Reset()
Reset()
Button Reset proc=ResetButton,title="Reset"
Button Proceed proc=RunMainLoop,title="Proceed"
HideTools/A
print numpnts(timew)
1000
HideInfo
HideInfo
ShowTools/A arrow
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TEXTIGR0 dSarcomereFunctions SarcomereFunctions #pragma rtGlobals=1 // Use modern global access method.
Function Passive(Mode, PT, SL, PTC) //Three functions that must use the same constants
//Using a scale factor on passives. Possibly try an offset to give more uniform popped lengths
Variable Mode //Determines which function
Variable PT //Desired passive tension for mode 0
Variable SL //Sarcomere length for all modes
Variable PTC //Passive Tension Coefficients for modes 1,2
Variable Lo=3.9 //Length at which passive tension = passive tension const
Variable Lambda=.5 //Length constant
switch(mode) // Choose function
case 0: // Return the Passive Tension Coefficient for given tension
Return PT/exp((SL-Lo)/Lambda)
break
case 1: // Return passive tension for given passive tension coefficient
return PTC*exp((SL-Lo)/Lambda)
break
case 2: // Return passive compliance of popped sarcomeres
Return Lambda/(PTC*exp((SL-Lo)/Lambda))
endswitch
End
Function MakeLT()
Make /o /n=6 CnrSL, CnrTen //SL and tension at the corners of the SL Tension curve
CnrSL={1.5, 1.8, 2.0, 2.2, 3.6,5}
CnrTen={0,.85, 1,1,0,0}
End
Function SL2PIso(SL)
variable SL
Wave CnrSL, CnrTen
Return Interp(SL, CnrSL,CnrTen)
End
Function P2V(P,PIso) //Finds sarcomere velocity for active sarcomeres
variable P,PIso
variable V
If (P0) //Active sarcs
dt=Choosedt() //Below.
DelSL=SarcVel*dt //Find change in active sarcs
TimeW[Step+1]=TimeW[Step]+dt
//Tension increment is sum of length changes over total compliance
TensionW[Step+1]=TensionW[step]-Area(DelSL,0,2*NumSarcs)/Area(Comp,0,2*NumSarcs)
//Need to add imposed velocity here.
SL=SL+DelSL
PIso=SL2PIso(SL)
PassTen=Passive(1,0,SL[p], PassTenCon[p])
End
Function Choosedt()
WAVE SarcVel, Comp
Wavestats /q SarcVel
variable dt
dt=-0.01/(V_Min-.05) //Choose dt,
//Print step, TensionW[step],V_min, dt
If (dt<0)
abort
endif
return dt
End
Window Distribution() : Panel
PauseUpdate; Silent 1 // building window...
NewPanel /W=(150,50,354,136) as "Distribution"
SetVariable NumSarcs,pos={2,4},size={184,15},proc=MakeSLDist,title="Number of sarcomeres"
SetVariable NumSarcs,limits={10,Inf,10},value= NumSarcs
SetVariable MeanSL,pos={0,21},size={186,15},proc=MakeSLDist,title="Mean sarcomere length"
SetVariable MeanSL,limits={1.2,4,0.1},value= MeanSL
SetVariable RandSL,pos={24,38},size={162,15},proc=MakeSLDist,title="Random amplitude"
SetVariable RandSL,limits={0,1,0.01},value= RandSL
SetVariable ExpSL,pos={3,55},size={182,15},proc=MakeSLDist,title="Exponential Amplitude"
SetVariable ExpSL,limits={0,1,0.1},value= ExpSL
EndMacro
Window CurrenthalfFibre() : Graph
PauseUpdate; Silent 1 // building window...
Display /W=(546,47,941,255) SL as "Current half fibre"
AppendToGraph/R PassTen,PIso
ModifyGraph mode(SL)=3
ModifyGraph marker(SL)=19
ModifyGraph rgb(PIso)=(0,0,65535)
ModifyGraph msize(SL)=1
SetAxis left 1.5,4
SetAxis right 0,1.5
EndMacro
Window LengthTension() : Graph
PauseUpdate; Silent 1 // building window...
Display /W=(453,309,848,517) CnrTen vs CnrSL as "Length Tension Curve"
EndMacro